BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB027C08SP1|AL428698
(864 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig495 1203 0.0
3x_Contig683 468 e-132
>3x_Contig495
Length = 1233
Score = 1203 bits (607), Expect = 0.0
Identities = 607/607 (100%)
Strand = Plus / Minus
Query: 1 ccgagtttaggtgatgacaatgatcggtgtttagttttagatgcagatggattgttcctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ccgagtttaggtgatgacaatgatcggtgtttagttttagatgcagatggattgttcctt 562
Query: 61 ttagcttctgaaaaccatacggaaagaatgcaaaaggcattgaaagggtatggtgataat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttagcttctgaaaaccatacggaaagaatgcaaaaggcattgaaagggtatggtgataat 502
Query: 121 cgtgtcgttatcactccgaatgcagtcgagttgaagcgaatcatgaatgcgttgaacgtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cgtgtcgttatcactccgaatgcagtcgagttgaagcgaatcatgaatgcgttgaacgtg 442
Query: 181 gattcggtggaaaaagttagtgagaagcttggatgtatcactgttgcaaagggacaaaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gattcggtggaaaaagttagtgagaagcttggatgtatcactgttgcaaagggacaaaat 382
Query: 241 gacattatcgttaattctcaaggtgaacgttgggaaaacgacgttcagggatctatgaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gacattatcgttaattctcaaggtgaacgttgggaaaacgacgttcagggatctatgaaa 322
Query: 301 agatgtggtggtcagggtgacacactgaccggtataatcgcaaccatgtttggtttctct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agatgtggtggtcagggtgacacactgaccggtataatcgcaaccatgtttggtttctct 262
Query: 361 cgtgcagtgcatgatttcaaattggaaacaatagtagaagaaggtaacggagaaaatctt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cgtgcagtgcatgatttcaaattggaaacaatagtagaagaaggtaacggagaaaatctt 202
Query: 421 ccttggtccaaaatggctatgctatcttgtttcatcggatctactgcaacaagaatggct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccttggtccaaaatggctatgctatcttgtttcatcggatctactgcaacaagaatggct 142
Query: 481 agcagggctgcttatgataaggtaggcagacaattgcaaactactgacatgaacaacatg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 agcagggctgcttatgataaggtaggcagacaattgcaaactactgacatgaacaacatg 82
Query: 541 gtgggagaagtgttcaatgagttataccctccttcacagtgaaccactgagaaagaaaaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 81 gtgggagaagtgttcaatgagttataccctccttcacagtgaaccactgagaaagaaaaa 22
Query: 601 acagact 607
|||||||
Sbjct: 21 acagact 15
>3x_Contig683
Length = 2652
Score = 468 bits (236), Expect = e-132
Identities = 253/256 (98%), Gaps = 2/256 (0%)
Strand = Plus / Plus
Query: 611 aagttgaacgcttttattattagtttgtaattagttcttggcatatatacatacatcaat 670
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1 aagttgaacgcttttattattagtttgtaattagtgcttggcatatatacatacatcaat 60
Query: 671 tacgaacactctttttatgactaaattacctttgcatctaaacttcacagcgtccattcg 730
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tacgaacactctttttatgactaaattacctttgcatctaaacttcacagcgtccattcg 120
Query: 731 tcaaagtataggacatctttatctg-aactggaagctgccatggaatttccgtgactgaa 789
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 121 tcaaagtataggacatctttatctgaaactggaagctgccatggaatttccgtgactgaa 180
Query: 790 tatagaatattcttctcttttcgaactttgttgt-ccccaacaggttgagtcatctgtaa 848
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 181 tatagaatattcttctcttttcgaactttgttgtcccccaacaggttgagtcatctgtaa 240
Query: 849 gacactttgcaacgtt 864
||||||||||||||||
Sbjct: 241 gacactttgcaacgtt 256
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6584
Number of Sequences: 1807
Number of extensions: 6584
Number of successful extensions: 47
Number of sequences better than 1.0e-20: 2
length of query: 864
length of database: 10,358,551
effective HSP length: 16
effective length of query: 848
effective length of database: 10,329,639
effective search space: 8759533872
effective search space used: 8759533872
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)